CDS

Accession Number TCMCG017C06049
gbkey CDS
Protein Id OMP07095.1
Location complement(join(6816..7094,7229..7406,7816..7961,8046..8138,8225..8344,9166..9220,9308..9382,9493..9581,9668..9749,9853..10054,10472..10627,10894..10945,11385..11501,12423..12532,12988..13021,13146..13202,14877..14958,16186..16261,16346..16416,16487..16607,16781..16856,17664..17791,17872..17963,18354..18394,19596..19727,20076..20222,20768..20830,20910..20987,21620..21751))
GeneID InterPro:IPR011989
Organism Corchorus olitorius
locus_tag COLO4_07633

Protein

Length 1027aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013412.1
Definition Armadillo-like helical [Corchorus olitorius]
Locus_tag COLO4_07633

EGGNOG-MAPPER Annotation

COG_category U
Description Transportin-3
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K15436        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005048        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008139        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042277        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAAGCCTGGAGCTACAGAACACTGTGAAAGAAGCCCTAAACGCACTGTACCATCACCCAGACGATGGGGTGCGTATGCAAGCTGATCGATGGCTGCAAGATTTTCAACGCACCATCGATGCTTGGCAGGTTGCTGATAATTTGCTTCATGATGCCACTAGCAATCTAGAGACTTTAATATTTTGTTCACAGACTCTTAGAAGCAAGGTACAACGAGATTTTGAAGAATTACCATCTGAAGCTTTTCGCCAATTAAGGGATTCCTTAAATATTAGCATTGCAGTTGCTGCTTTGGCTGTACATGTTCCTGCGGAAGACTGGGGAGATGGTGGTATAGTGAATTGGCTTCGGGTTGAGATGAACTCTCATCCGGATTATATACCCGGATTTTTGGAGCTGCTTACTGTCTTGCCTGAGGAAACTTTCAACTACAAGATAGCAGCTCGCCCTGAGCGACGCCGTCATTTTGAGAAAGAGCTCACTTCACAAATGGAAACTGTTCTTAATATACTCACAACTTGCTTAAATATAAGTGAACTGAAAGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGGCTAAAGCATGGGATCCCTGGGTCTGTGCTTGCAGCCCACCCATTGGTGCTAACAGCTCTTTCAAGCTTAAACTCTGAAATACTTTCAGAGGCTTCTGTTAACGTTGTTTCTGAATTGATACACTACACAGCATCAGGAAGCTCTGGTGGTGTTTCTGTACAAATGCCATTAATTCAAGTACTTGTGCCTCAAGTTATGAGTTTACAGGCACAACTTAGAGATTCTTCAAAGGATGAGGAAGATGTGAAAGCCATTGCTCGTTTATTTGCAGATATGGGAGATTCATATGTAGAACTAATAGCAACTGGTTCAAGTGAAGCGATGATGATAGTTAATGCCTTGTTGGAAGTTGCTTCTGTTCCAGAATATGATATTGCTTCAATGACGTTTAACTTTTGGCACAGTCTTCAGGTTATCTTGACAAAAAGGAATTCCAATAGTTCATTTGGTGATGAAGCATCCATTGAAGCTGAGAGAAATCGGAGGCTTCAAATTTTTTTTAAAACCTGTAGTGCCCCTGCTGTAGTAAATGGTGAAAGGCACCTCAAGGATGCTACTGACCTTGTTTTGCTCAGGTTAGCTCCCGAGTTCAATATCCCCAAGACTATCAAGAACTTTCATATGAGGATCTCAAGGAATTCAAACAGACTAGATATGATTTTTAAGTTGCCTGTTCAATGTAACATTTTCAGCAGATGGATAAGCCGTGGGCTGTTCATGGTTCAGTTTCATTCCATTCCATCTCGTAACCCTGATGGATCTGTTATGTTGCTAGCTGTTGCGGATGTCTTAACTGATGCGGCATCAGTTTTAGGTGGTGCTGCAACATTGGAAATTCTATATGTGAAGCTTGTAGAGGCTGTATCTTGCTGTGGACATGAAAATGGTGAATGGCGTCCAGCTGAGGCTGCTTTATTTTGTATTCGGGCAATATCAAATTATGTTTCAGTTGTTGAAGAAAACGTAATGCCTCAGGTGATGGATCTGCTCTTGAAATTACCTCATCAGCCTCAGCTTCTTCAAACGGTTTGCTTAATTATTGGAGCATACTCTAAGTGGCTTGATGCTGCACCGAGTGGTTTTTCAAAGTTGCCTCTGGTGATTGAAATTCTCATGAGTGGCATGCGTACCTCTGAAGATTCTGCAGCAGCTGCTGCTTTGGCATTTAGGCACATCTGTGATGATGGGGAAGATGATTTCCTTTATGATTCTTCATGCGGCATTTTAAACTCTGAACCCAAATTGTTCCTGTTTAATGCAGATTGCCGCAAAAAGCTTTGTGCTTATTGTAAACAGCTTTTCCATATATACTATACAGCAGTTAATGGGGAAGGTAGTTTTAAAGGCTCTGCTGAGGACTCTTTGCACTTAGTAGAAGCTTTGAGTATGGTTATTACTGAACTTCCACCAGAGCCTGCTAAGGATGCCTTGGAGGAACTCTGCTCATCAGTTGTTACTCCTTTACAGGAAGTTATCAACCAAGGTCCAGAAGTTTTAGAGAAGAAACATGCTCGTGAATTAACTGTTCACATTGATCGATTTGCATATATCTTTCGGTATGTAAATCATCCTGGAGCGGTCGCTGATGCAATTCACAGGCTTTGGCCAATATTCAAAGCCATATTTGATCTTCGTGCTTGGGACATGCGAACAATGGAGTCTCTTTGCCGTGCTTGCAAATATGCTGTGAGGACTTCTGGAAGGCTTATGGGAATCACAATCGGAGCAATGCTTGAAGAAATACAAGGCCTGTATCAACAACACCACCAGCCATGTTTCCTTTATTTATCTAGTGAAGTTATAAAGATATTTGGCTCTGACCCTGCTTGTGCAAGCTACCTAAAAAATATGATTGAAGCTCTCTTCACACGTACAACATGTCTTCTTACAAATATTAAGGAATTCACTACGAGACCAGACATAGCTGATGACTGTTTTCTATTGGCATCAAGGTGCATTCGGTATTGTCCTCAATTATTTATTCCTTCTGCTGTATTTCCAGCCTTAGTAGATTGCTCAGTGATTGGGATCACGGTACAACACAGGGAAGCTTCCAATTCCGTTTTGACTTTCTTGTCTGATATTTTTGACCTTGCAAAATCTAGCAAGGGAGAACAATTTTTATCAATTAGGGATAATGTGGTTATTCCACGAGGTGCAACCATTACCAGAGTGTTGGTGGCAGCCCTAACAGGAGCGCTTCCAAGTTCCCGATTAGAAACGGTAACATATGCACTTCTAGCATTAACTCGAGCATATGGGATGCAAGCTTTGGAGTGGGCGAGGGAAAGTGTTTCATTGATCCCATTGACTGCTGTGAAGGAGGTGGAACGGTCAAGATTTTTGCAAGCGTTGTCGGATGCAGCCTCAGGGGCAGATGTGAATGCATTGATGGCTCCAGTGGAAGAGTTATCTGATGTTTGTCGTCGTAATCGAACAGTTCAAGAGATAGTTCAGGGAGCGTTAAAGCCACATGAGTTGAATATGGTAGGTGTATCATAG
Protein:  
MQSLELQNTVKEALNALYHHPDDGVRMQADRWLQDFQRTIDAWQVADNLLHDATSNLETLIFCSQTLRSKVQRDFEELPSEAFRQLRDSLNISIAVAALAVHVPAEDWGDGGIVNWLRVEMNSHPDYIPGFLELLTVLPEETFNYKIAARPERRRHFEKELTSQMETVLNILTTCLNISELKEQVLEAFASWLRLKHGIPGSVLAAHPLVLTALSSLNSEILSEASVNVVSELIHYTASGSSGGVSVQMPLIQVLVPQVMSLQAQLRDSSKDEEDVKAIARLFADMGDSYVELIATGSSEAMMIVNALLEVASVPEYDIASMTFNFWHSLQVILTKRNSNSSFGDEASIEAERNRRLQIFFKTCSAPAVVNGERHLKDATDLVLLRLAPEFNIPKTIKNFHMRISRNSNRLDMIFKLPVQCNIFSRWISRGLFMVQFHSIPSRNPDGSVMLLAVADVLTDAASVLGGAATLEILYVKLVEAVSCCGHENGEWRPAEAALFCIRAISNYVSVVEENVMPQVMDLLLKLPHQPQLLQTVCLIIGAYSKWLDAAPSGFSKLPLVIEILMSGMRTSEDSAAAAALAFRHICDDGEDDFLYDSSCGILNSEPKLFLFNADCRKKLCAYCKQLFHIYYTAVNGEGSFKGSAEDSLHLVEALSMVITELPPEPAKDALEELCSSVVTPLQEVINQGPEVLEKKHARELTVHIDRFAYIFRYVNHPGAVADAIHRLWPIFKAIFDLRAWDMRTMESLCRACKYAVRTSGRLMGITIGAMLEEIQGLYQQHHQPCFLYLSSEVIKIFGSDPACASYLKNMIEALFTRTTCLLTNIKEFTTRPDIADDCFLLASRCIRYCPQLFIPSAVFPALVDCSVIGITVQHREASNSVLTFLSDIFDLAKSSKGEQFLSIRDNVVIPRGATITRVLVAALTGALPSSRLETVTYALLALTRAYGMQALEWARESVSLIPLTAVKEVERSRFLQALSDAASGADVNALMAPVEELSDVCRRNRTVQEIVQGALKPHELNMVGVS